I extended the kinetic theory of dilute polymer solutions under external fields to include finite-chain extensibility, and to properly account for wall-inducedhydrodynamic interactions. I developed formulas for the scaling of the depletion layer with the Peclet number and for the variation of molecular stretch and normal stresses; I also derived migration tensors for the Green’s…
Langevin Dynamics of Polymer Translocation
During my early PhD studies I focused on molecular dynamics simulations of DNA in Gromacs and an efficient implementation of multigrid methods. Later, I started developing a C++/Fortran code to model the transport of biomolecules in micro-devices under elektrokinetic flows. I developed anovel hybrid method that combines Langevin dynamics for a bead-spring DNA model, and…
Molecular Dynamics and Dielectrophoretic Separation of Microparticles
This work focused on the theoretical analysis of a prototype device for dielectrophoretic particle separation reported in the literature. Motivated by the effort to minimize the number of adjustable parameters used by the original authors, I quantified the electrophoretic, dielectrophoretic and electroosmotic effects more precisely using a multipole expansion. For details, see the appendix of…
Robust method for digital filtering of noisy images
We study maximum likelihood estimates applied to image processing, with focus on robust and efficient de-noising of medical images produced by nuclear magnetic resonance.
Stabilization of nonlinear systems: magnetic levitation model
We developed a control and stabilization scheme for a non-linear, unstable magnetic levitation system, using linearization methods and Lyapunov stability concepts. Czech version only.
Fuzzy control of traffic lights
As part of developing artificial intelligence proof-of-concepts, we analyzed the feasibility of using a fuzzy-logic controller for the dynamic management of traffic lights at road intersections.